The Charon's crew quarters are spread out over several decks. Deck 2 contains senior officer quarters, guest suites, two command suites, a Captain's suite, and two luxury diplomatic suites. Deck 3 contains more senior officer quarters and junior officer quarters. Deck 4 contains additional junior officer quarters and senior enlisted quarters, also comprising of several shared quarters. Deck 10 mainly consists of shared quarters and enlisted bunks, the marine barracks is also located on Deck 10.
Deck 2
- Quarters 201 (Captain's Quarters): Captain Shiarrael t`Rehu
- Quarters 202: Captain Shaun Fisher & Lieutenant Lylan Krios (shared)
- Quarters 203: Commander Dylan Marcus
- Quarters 204: Lieutenant Commander Ch'Tan Foster & Lieutenant D'Vana Xavier
- Quarters 205: Commander Eithne Falcon & Commander Jade Falcon
Deck 3
- Quarters 301: Commander David King
- Quarters 302: Lieutenant Waqas Jilani
- Quarters 303: Lieutenant Commander Sakarra Tyrax
- Quarters 305: Arrain M'Narth tr'Lhoell
- Quarters 308: Lieutenant Nimue Andraste
- Quarters 309: Ambassador Ian Lamont
Deck 4
- Quarters 406: Arrain Aehlen tr'Kethry
- Quarters 407: EnArrain Rhiana t`Khellian
- Quarters 412: Lieutenant Nathanial Doyle
- Quarters 413: Lieutenant JG Indira Bai
- Quarters 416: Warrant Officer Oberic Sierra
- Quarters 417: Lieutenant Suuraht
Deck 10
- Quarters 1001: Marine Captain Nikolai Chernienko
- Quarters 1002: 1st Lieutenant Brent Warren
- Quarters 1015: Ensign Thomas J Clipper
- Quarters 1018:
- Quarters 1019: erie'Arrain Aerv t'Jaihen
- Quarters 1020: Ensign Kallistra Grey